Below you may find selected research articles from Biology, Chemistry, and Environmental Sciences faculty in the Schmid College of Science and Technology.

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Submissions from 2017

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Dynamic Assembly of Ultrasoft Colloidal Networks Enables Cell Invasion Within Restrictive Fibrillar Polymers, Alison M. Douglas, Alexandros A. Fragkopoulos, Michelle K. Gaines, L. Andrew Lyon, Alberto Fernandez-Nieves, and Thomas H. Barker

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Hagfish Houdinis: Biomechanics and Behavior of Squeezing Through Small Openings, Calli R. Freedman and Douglas S. Fudge

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Rapid Increase in Genetic Diversity in an Endemic Patagonian Tuco-Tuco Following a Recent Volcanic Eruption, Jeremy L. Hsu, Sharon Kam, Mauro N. Tammone, Eileen A. Lacey, and Elizabeth A. Hadly

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Catalysis in Real Time Using X-Ray Lasers, A. Nilsson, Jerry L. LaRue, H. Öberg, H. Ogasawara, M. Dell’Angela, M. Beye, H. Öström, J. Gladh, J. K. Nørskov, W. Wurth, F. Abild-Pedersen, and L. G. M. Pettersson

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The Long Shadow of Senescence: Age Impacts Survival and Territory Defense in Loons, Walter H. Piper, Kristin M. Brunk, Joel A. Flory, and Michael W. Meyer

Submissions from 2016

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The Hagfish Gland Thread Cell: A Fiber-Producing Cell Involved in Predator Defense, Douglas S. Fudge and Sarah Schorno

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Testing the Trait-Based Community Framework: Do Functional Traits Predict Competitive Outcomes?, Jennifer L. Funk and Amelia Wolf

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Association and Regulation of Protein Factors of Field Effect in Prostate Tissues, Kristin N. Gabriel, Anna C. Jones, Julie P.T. Nguyen, Kresta S. Antillon, Sara N. Janos, Heidi N. Overton, Shannon M. Jenkins, Emily H. Frisch, Kristina A. Trujillo, and Marco Bisoffi

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Theoretical Investigation of Interaction Between the Set of Ligands and α7 Nicotinic Acetylcholine Receptor, O. E. Glukhova, Tatiana Prytkova, and D. S. Shmygin

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The Explorations Program: Benefits of Single-Session, Research- Focused Classes for Students and Postdoctoral Instructors, Jeremy L. Hsu, Anna M. Wrona, Sarah E. Brownell, and Waheeda Khalfan

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Can Functional Traits Predict Plant Community Response to Global Change?, Sarah Kimball, Jennifer L. Funk, Marko J. Spasojevic, Katharine N. Suding, Scot Parker, and Michael K. Goulden

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Can Functional Traits Predict Plant Community Response to Global Change?, Sarah Kimball, Jennifer L. Funk, Marko J. Spasojevic, Katharine N. Suding, Scot Parker, and Michael K. Goulden

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Regeneration: An Overlooked Aspect of Trait-Based Plant Community Assembly Models, Julie Larson and Jennifer L. Funk

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Inhibition of Human α7 Nicotinic Acetylcholine Receptors by Cyclic Monoterpene Carveol, Yusra Lozon, Ahmed Sultan, Stuart J. Lansdell, Tatiana Prytkova, Bassem Sadek, Keun-Hang Susan Yang, Frank Christopher Howarth, Neil S. Millar, and Murat Oz

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Success Stories and Emerging Themes in Conservation Physiology, Christine L. Madliger, Steven J. Cooke, Erica J. Crespi, Jennifer L. Funk, Kevin R. Hultine, Kathleen E. Hunt, Jason R. Rohr, Brent J. Sinclair, Cory D. Suski, Craig K. R. Willis, and Oliver P. Love

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Evolutionary Responses of Invasive Grass Species to Variation in Precipitation and Soil Nitrogen, Monica A. Nguyen, Amy E. Ortega, Quoc L. Nguyen, Sarah Kimball, Michael L. Goulden, and Jennifer L. Funk

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Enabling method to design versatile biomaterial systems from colloidal building blocks, Shalini Saxena and L. Andrew Lyon

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The Role of Ions in the Self-Healing Behavior of Soft Particle Suspensions, Andrea Scotti, Urs Gasser, Emily S. Herman, Miguel Pelaez-Fernandez, Jun Han, Andreas Menzel, L. Andrew Lyon, and Alberto Fernandez-Nieves

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Better Cognitive Control of Emotional Information is Associated with Reduced Pro-Inflammatory Cytokine Reactivity to Emotional Stress, Grant S. Shields, Shari Young Kuchenbecker, Sarah D. Pressman, Ken D. Sumida, and George M. Slavich

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Effect of Green Tea on Interaction of Lipid Oxidation Products With Sarcoplasmic and Myofibrillar Protein Homogenates Extracted from Bovine Top Round Muscle, Nahathai Stapornkul, Tatiana Prytkova, and Lilian Were

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Stability of Peatland Carbon to Rising Temperatures, R. M. Wilson, A. M. Hopple, M. M. Tfaily, S. D. Sebestyen, C. W. Schadt, L. Pfeifer-Meister, Cassandra Medvedeff, K. J. McFarlane, J. E. Kostka, M. Kolton, R. K. Kolka, L. A. Kluber, Jason K. Keller, T. P. Guilderson, N. A. Griffiths, J. P. Chanton, S. D. Brigham, and P. J. Hanson

Submissions from 2015

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Negative Skeletal Effects of Locally Produced Adiponectin, Marcia J. Abbott, Theresa M. Roth, Linh Ho, Liping Wang, Dylan O'Carroll, and Robert A. Nissenson

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Effects of Cannabidiol on Contractions and Calcium Signaling in Rat Ventricular Myocytes, Ramez M. Ali, Lina T. Al Kury, Keun-Hang Susan Yang, Anwar Qureshi, Mohanraj Rajesh, Sehamuddin Galadari, Yaroslav M. Shuba, Frank Christopher Howarth, and Murat Oz

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Detection and Tracking of T Cells in Time-lapse Imaging, Cody Arbuckle, Milton L. Greenberg, and Erik J. Linstead

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Biological Evolution in Canadian Science Curricula, Anila Ashgar, Sarah Bean, Wendi O'Neill, and Brian Alters

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Dimethylsulfide Gas Transfer Coefficients from Algal Blooms in the Southern Ocean, T. G. Bell, Warren J. De Bruyn, Christa A. Marandino, S. D. Miller, C. S. Law, and Eric S. Saltzman

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The Genetic Ancestry of African Americans, Latinos, and European Americans Across the United States, Katarzyna Bryc, Eric Y. Durand, J. Michael Macpherson, David Reich, and Joanna Mountain

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Erratum to: Zn (II) and Cu (II) Adsorption and Retention onto Iron Oxyhydroxide Nanoparticles: Effects of Particle Aggregation and Salinity, Rebecca B. Chesne and Christopher S. Kim

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Temporal Variation in Optical Properties of Chromophoric Dissolved Organic Matter (CDOM) in Southern California Coastal Waters with Nearshore Kelp and Seagrass, Catherine D. Clark, Warren J. De Bruyn, and Paige Aiona

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Remote Sensing and Modeling of Atmospheric Dust and Studying Its Impact on Environment, Weather, and Climate, Hesham el-Askary, Seon K. Park, Slobodan Nickovic, and Mian Chin

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On the Detection and Monitoring of the Transport of an Asian Dust Storm Using Multi-Sensor Satellite Remote Sensing, Hesham el-Askary, S. K. Park, M. H. Ahn, A. Prasad, and Menas Kafatos

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Study of Aerosols’ Characteristics and Dynamics over the Kingdom of Saudi Arabia Using a Multisensor Approach Combined with Ground Observations, Ashraf Farahat, Hesham el-Askary, and Abdulaziz Al-Shaibani

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On the Analysis of Phylogenetically Paired Designs, Jennifer L. Funk, Cyril Rakovski, and J. Michael Macpherson

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Plant Functional Traits of Dominant Native and Invasive Species in Mediterranean-Climate Ecosystems, Jennifer L. Funk, Rachel J. Standish, William D. Stock, and Fernando Valladares

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THz-Pulse-Induced Selective Catalytic CO Oxidation on Ru, Jerry L. LaRue, Tetsuo Katayama, Aaron Lindenberg, Alan S. Fisher, Henrik Öström, Anders Nilsson, and Hirohito Ogasawara

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Optical Laser-Induced CO Desorption from Ru(0001) Monitored with a Free-Electron X-ray Laser: DFT Prediction and X-ray Confirmation of a Precursor State, H. Öberg, J. Gladh, M. Dell'Angela, T. Anniyev, M. Beye, R. Coffee, A. Föhlisch, T. Katayama, S. Kaya, Jerry L. LaRue, A. Møgelhøj, D. Nordlund, H. Ogasawara, W. F. Schlotter, J. A. Sellberg, F. Sorgenfrei, J. J. Turner, M. Wolf, W. Wurth, H. Öström, A. Nilsson, J. K. Nørskov, and L. G. M. Pettersson

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Probing the Transition State Region in Catalytic CO Oxidation on Ru, H. Öström, H. Öberg, H. Xin, Jerry L. LaRue, M. Beye, M. Dell'Angela, J. Gladh, M. L. Ng, J. A. Sellberg, S. Kaya, G. Mercurio, D. Nordlund, M. Hantschmann, F. Hieke, D. Kühn, W. F. Schlotter, G. L. Dakovski, J. J. Turner, M. P. Minitti, A. Mitra, S. P. Moeller, A. Föhlisch, M. Wolf, W. Wurth, M. Persson, J. K. Nørskov, F. Abild-Pedersen, H. Ogasawara, L. G. M. Pettersson, and A. Nilsson

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Studying Air Pollutants Origin and Associated Meteorological Parameters over Seoul from 2000 to 2009, Sunmin Park, Hesham el-Askary, Ismail Sabbah, Hanbin Kwak, Anup K. Prasad, Woo-Kyun Lee, and Menas Kafatos

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Influence of Microgel Packing on Raspberry-Like Heteroaggregate Assembly, Shalini Saxena and L. Andrew Lyon

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The Effects of Actomyosin Disruptors on the Mechanical Integrity of the Avian Crystalline Lens, Gah-Jone Won, Douglas S. Fudge, and Vivian Choh

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Strong Influence of Coadsorbate Interaction on CO Desorption Dynamics on Ru(0001) Probed by Ultrafast X-Ray Spectroscopy and Ab Initio Simulations, H. Xin, Jerry L. LaRue, H. Öberg, M. Beye, M. Dell'Angela, J. J. Turner, J. Gladh, M. L. Ng, J. A. Sellberg, S. Kaya, G. Mercurio, F. Hieke, D. Nordlund, W. F. Schlotter, G. L. Dakovski, M. P. Minitti, A. Föhlisch, M. Wolf, W. Wurth, H. Ogasawara, J. K. Nørskov, H. Öström, L. G. M. Pettersson, A. Nilsson, and F. Abild-Pedersen

Submissions from 2014

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Effects of Endogenous Cannabinoid Anandamide on Voltage-Dependent Sodium and Calcium Channels in Rat Ventricular Myocytes, Lina T. Al Kury, Oleg I. Voitychuk, Keun-Hang Susan Yang, Faisal T. Thayyullathil, Petro Doroshenkp, Ali M. Ramez, Yaroslav M. Shuba, Sehamuddin Galadari, Frank Christopher Howarth, and Murat Oz

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Spontaneous Unraveling of Hagfish Slime Thread Skeins is Mediated by a Seawater-soluble Protein Adhesive, Mark A. Bernards Jr., Isdin Oke, Andreas Heyland, Douglas S. Fudge, and Douglas S. Fudge

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Weekly Gridded Aquarius L-Band Radiometer/Scatterometer Observations and Salinity Retrievals Over the Polar Regions - Part 1: Product Description, L. Brucker, Emmanuel P. Dinnat, and L. S. Koenig

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Weekly Gridded Aquarius L-Band Radiometer/Scatterometer Observations and Salinity Retrievals Over the Polar Regions - Part 2: Initial Product Analysis, L. Brucker, Emmanuel P. Dinnat, and L. S. Koenig

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Zn(Ii) and Cu(Ii) Adsorption and Retention Onto Iron Oxyhydroxide Nanoparticles: Effects Of Particle Aggregation and Salinity, Rebecca B. Chesne and Christopher S. Kim

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Optical Characterization and Distribution of Chromophoric Dissolved Organic Matter (CDOM) in Soil Porewater from a Salt Marsh Ecosystem, Catherine D. Clark, Paige Aiona, Jason K. Keller, and Warren J. De Bruyn

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Analysis of Ligand Bias in Functional Studies Involving the Allosteric Modulation of G Protein- Coupled Receptors, Frederick J. Ehlert and Michael T. Griffin

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Fifty Years of JR Platt’s “Strong Inference”, Douglas S. Fudge

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Protection of Ecosystem Services: A Way Forward After Weed Management Area Cuts, Jennifer L. Funk, Virginia Matzek, and Doug Johnson

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Form Factor of pNIPAM Microgels in Overpacked States, U. Gasser, J. S. Hyatt, J.- J. Lietor-Santos, E. S. Herman, L. Andrew Lyon, and A. Fernandez-Nieves

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Eco-mechanics of Lamellar Autotomy in Larval Damselflies, Jennifer E. Gleason, Douglas S. Fudge, and Beren W. Robinson

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Defensive Slime Formation in Pacific Hagfish Requires Ca2+ and Aquaporin Mediated Swelling of Released Vesicles, Julie E. Herr, Alexander M. Clifford, Greg G. Goss, Douglas S. Fudge, and Douglas S. Fudge

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Application of the Savitzky-Golay Filter to Land Cover Classification Using Temporal MODIS Vegetation Indices, So-Ra Kim, Anup K. Prasad, Hesham el-Askary, Woo- Kyun Lee, Doo- Ahn Kwak, Seung- Ho Lee, and Menas Kafatos

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Connecting Model Species to Nature: Predator-Induced Long-Term Sensitization in Aplysia californica, Maria J. Mason, Amanda J. Watkins, Jordann Wakabayashi, Jennifer Buechler, Christine Pepino, Michelle Brown, and William G. Wright

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Closing the Knowing-Doing Gap in Invasive Plant Management: Accessibility and Interdisciplinarity of Scientific Research, Virginia Matzek, Justin Covino, Jennifer L. Funk, and Martin Saunders

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Microgel Mechanics in Biomaterial Design, Shalini Saxena, Caroline E. Hansen, and L. Andrew Lyon

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Regional Dust Storm Modeling for Health Services: The Case of Valley Fever, William A. Sprigg, Slobodan Nickovic, John N. Galgiani, Goran Pejanovic, Slavo Petkovic, Mirjam Vujadinovic, Ana Vukovic, Milan Dacic, Scott DiBiase, Anup K. Prasad, and Hesham el-Askary

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Disposable Platform Provides Visual and Color-Based Point-of-Care Anemia Self-Testing, Erika A. Tyburski, Scott E. Gillespie, William A. Stoy, Robert G. Mannino, Alexander J. Weiss, Alexa F. Siu, Rayford H. Bulloch, Karthik Thota, Anyela Cardenas, Wilena Session, Hanna J. Khoury, Siobhán O'Connor, Silvia T. Bunting, Jeanne Boudreaux, Craig R. Forest, Manila Gaddh, Traci Leong, L. Andrew Lyon, and Wilbur A. Lam

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Beta-Alanine Suppresses Malignant Breast Epithelial Cell Aggressiveness Through Alterations In Metabolism and Cellular Acidity In Vitro, Roger A. Vaughan, Nicholas P. Gannon, Randi Garcia-Smith, Yamhilette Licon-Munoz, Miguel A. Barberena, Marco Bisoffi, and Kristina A. Trujillo

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Numerical Simulation of “An American Haboob”, A. Vukovic, M. Vujadinovic, G. Pejanovic, J. Andric, M. J. Kumjian, V. Djurdjevic, M. Dacic, Anup K. Prasad, Hesham el-Askary, B. C. Paris, S. Petkovic, W. Sprigg, and S. Nickovic

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Coiling and Maturation of a High-Performance Fibre in Hagfish Slime Gland Thread Cells, Timothy Winegard

Submissions from 2013

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Menthol Binding and Inhibition of a7-Nicotinic Acetylcholine Receptors, Abrar Ashoor, Jacob C. Nordman, Daniel Veltri, Keun-Hang Susan Yang, Lina T. Al Kury, Yaroslav M. Shuba, Mohamed Magoub, Frank Christopher Howarth, Bassem Sadek, Amarda Shehu, Nadine Kabbani, and Murat Oz

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Air-Sea Dimethylsulfide (Dms) Gas Transfer In the North Atlantic: Evidence For Limited Interfacial Gas Exchange At High Wind Speed, T. G. Bell, Warren J. De Bruyn, S. D. Miller, B. Ward, K. Christensen, and E. S. Saltzman

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Annual Patterns of Atmospheric Pollutions and Episodes over Cairo Egypt, Y. Aboel Fetouh, Hesham el-Askary, Mohamed El Raey, Mohamed Allali, W. A. Sprigg, and Menas Kafatos

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The Physiology of Invasive Plants in Low-Resource Environments, Jennifer L. Funk

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Leaf Traits Within Communities: Context May Affect the Mapping of Traits to Function, Jennifer L. Funk and William K. Cornwell

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Differential Allocation to Photosynthetic and Non-Photosynthetic Nitrogen Fractions among Native and Invasive Species, Jennifer L. Funk, Lori A. Glenwinkle, and Lawren Sack

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Plastic Deformation, Wrinkling, and Recovery in Microgel Multilayers, Jeffrey C. Gaulding, Mark W. Spears Jr., and L. Andrew Lyon

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Anaerobic Metabolism In Tidal Freshwater Wetlands: I. Plant Removal Effects on Iron Reduction and Methanogenesis, Jason K. Keller, Ariana E. Sutton-Grier, Allyson L. Bullock, and J. Patrick Megonigal

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Solid-Phase Organic Matter Reduction Regulates Anaerobic Decomposition in Bog Soil, Jason K. Keller and Kimberly K. Takagi

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Development of Self-Assembling Mixed Protein Micelles with Temperature-Modulated Avidities, Allyson S.C. Soon, Michael H. Smith, Emily S. Herman, L. Andrew Lyon, and Thomas H. Barker

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Gamete Donor Selection Based on Genetic Calculations. U.S. Patent 8,543,339, Anne Wojcicki, Linda Avey, Joanna Mountain, J. Michael Macpherson, and Joyce Y. Tung

Submissions from 2012

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Assessing Satellite-Based Rainfall Estimates In Semiarid Watersheds Using the Usda-Ars Walnut Gulch Gauge Network and Trmm Pr, Eyal Amitai, Carl L. Unkrich, David C. Goodrich, Emad Habib, and Bryson Thill

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The Mechanical Behavior of Mutant K14-R125P Keratin Bundles and Networks in NEB-1 Keratinocytes, Daniel R. Beriault, Oualid Haddad, John V. McCuaig, Zachary J. Robinson, David Russell, E. Birgitte Lane, and Douglas S. Fudge

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Structural Properties of Thermoresponsive Poly(N-isopropylacrylamide)-poly(ethyleneglycol) Microgels, J. Clara-Rahola, A. Fernandez-Nieves, B. Sierra-Martin, A. B. South, L. Andrew Lyon, J. Kohlbrecher, and A. F. Barbero

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A Functional Trait Perspective on Plant Invasion, Rebecca E. Drenovsky, Brenda J. Grewell, Carla M. D'Antonio, Jennifer L. Funk, Jeremy J. James, Nicole Molinari, Ingrid M. Parker, and Christina L. Richards

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Regulation of Hard α-keratin Mechanics via Control of Intermediate Filament Hydration: Matrix Squeeze Revisited, Daniel A. Greenberg and Douglas S. Fudge

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Cryptic Distant Relatives Are Common in Both Isolated and Cosmopolitan Genetic Samples, Brenna M. Henn, Lawrence S. Hon, J. Michael Macpherson, Nicholas Eriksson, Serge Saxonov, Itsik Pe'er, and Joanna Mountain

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Synergistic Use of Remote Sensing and Modeling for Tracing Dust Storms in the Mediterranean, D. G. Kaskaoutis, Anup K. Prasad, P. G. Kosmopoulos, P. R. Sinha, S. K. Kharol, P. Gupta, Hesham el-Askary, and Menas Kafatos

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Soil Organic Carbon Storage in Restored Salt Marshes in Huntington Beach, California, Jason K. Keller, Kimberly K. Takagi, Morgan E. Brown, Kellie N. Stump, and Chelsea G. Takahashi

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Toward a Framework For Systematic Error Modeling Of Spaceborne Precipitation Radar With Noaa/Nssl Ground Radar Based National Mosaic Qpe, Pierre-Emmanuel Kirstetter, Y. Hong, J. J. Gourley, S. Chen, Z. Flamig, J. Zhang, M. Schwaller, W. Peterson, and Eyal Amitai

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Personality Type Differences Between Ph.D. Climate Researchers and the General Public: Implications for Effective Communication, C. Susan Weiler, Jason K. Keller, and Christina Olex

Submissions from 2011

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Evaluation Of Satellite-Retrieved Extreme Precipitation Rates Across the Central United States, A. AghaKoucak, A. Behrangi, S. Sorooshian, K. Hsu, and Eyal Amitai

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Analysis of Agonism and Inverse Agonism in Functional Assays with Constitutive Activity: Estimation of Orthosteric Ligand Affinity Constants for Active and Inactive Receptor States, Frederick J. Ehlert, Michael T. Griffin, and Hinako Suga

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Analysis of Functional Responses at G Protein-Coupled Receptors: Estimation of Relative Affinity Constants for the Inactive Receptor Sstate, Frederick J. Ehlert, Michael T. Griffin, and Hinako Suga

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Quantifying Agonist Activity at G Protein-coupled Receptors, Frederick J. Ehlert, Hinako Suga, and Michael T. Griffin

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Intermediate Filaments Regulate Tissue Size and Stiffness in the Murine Lens, Douglas S. Fudge, John V. McCuaig, Shannon Van Stralen, John F. Hess, Huan Wang, Richard T. Mathias, and Paul G. FitzGerald

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Three-Year Ground Based Measurements of Aerosol Optical Depth over the Eastern Mediterranean: The Urban Environment of Athens, E. Gerasopoulos, V. Amiridis, S. Kazadzis, P. Kokkalis, K. Eleftheratos, M. O. Andrae, T. W. Andrae, Hesham el-Askary, and C S. Zerefos

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Control of Poly(N-isopropylacrylamide) Microgel Network Structure by Precipitation Polymerization near the Lower Critical Solution Temperature, Xiaobo Hu, Zhen Tong, and L. Andrew Lyon

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Synthesis and Physicochemical Properties of Cationic Microgels Based on Poly(N-isopropylmethacrylamide), Xiaobo Hu, Zhen Tong, and L. Andrew Lyon

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Communication: Bubbles, Crystals, and Laser-Induced Nucleation, Brandon C. Knott, Jerry L. LaRue, Alec M. Wodtke, Michael F. Doherty, and Baron Peters

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Aerosol Climatology Over Nile Delta Based on MODIS, MISR and OMI Satellite Data, H. S. Marey, J. C. Gille, Hesham el-Askary, E. A. Shalaby, and Mohamed El Raey

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An Upper Limit for Macromolecular Crowding Effects, Andrew C. Miklos, Congang Li, Courtney D. Sorell, L. Andrew Lyon, and Gary J. Pielak

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Climatic Drivers of Potential Hazards in Mediterranean Coasts, Agustin Sanchez-Arcilla, Cesar Mosso, Joan Pau Sierra, Marc Mestres, Ali Harzallah, Mohamed Senouci, Mohamed El Raey, and Hesham el-Askary

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Bulk Modulus of Poly(N-isopropylacrylamide) Microgels Through the Swelling Transition, B. Sierra-Martin, Y. Laporte, A. B. South, L. Andrew Lyon, and A. Fernandez-Nieves

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Network Deconstruction Reveals Network Structure in Responsive Microgels, Michael H. Smith, Emily S. Herman, and L. Andrew Lyon

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Tunable Encapsulation of Proteins within Charged Microgels, Michael H. Smith and L. Andrew Lyon

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Can Resource-Use Traits Predict Native vs. Exotic Plant Success in Carbon Amended Soils?, Robert J. Steers, Jennifer L. Funk, and Edith B. Allen

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Efficient Replication of over 180 Genetic Associations with Self-Reported Medical Data, Joyce Y. Tung, Chuong B. Do, David A. Hinds, Amy K. Kiefer, J. Michael Macpherson, Arnab B. Chowdry, Uta Francke, Brian Naughton, Joanna Mountain, Anne Wojcicki, and Nicholas Eriksson